Characterization of flowering time and SSR marker analysis of spring and winter type Brassica napus L. germplasm

Flowering dates and life forms of all available Brassica napus accessions conserved at the North Central Regional Plant Introduction Station (NCRPIS) were characterized, and a survey of molecular variation was conducted by using simple sequence repeats (SSR) in order to support better management of accessions with diverse life forms. To characterize flowering phenology, 598 B. napus accessions from the NCRPIS collection were planted in Iowa and Kansas field sites together with a current commercial cultivar and observed for days to flowering (first, 50% and 100% flowering) in 2003. Days from planting to 50% flowering ranged from 34 to 83 in Iowa and from 53 to 89 in Kansas. The mean accumulated growing degree days (GDD) to 50% flowering were 1,997 in Iowa, and 2,106 in Kansas. Between locations, the correlation in flowering time (r = 0.42) and the correlation in computed GDD (r = 0.40) were both significant. Differences in flowering-time rank were observed for several accessions. Accessions that failed to flower in Iowa in a single growing season comprised 28.5% of the accessions; of the flowering accessions, 100% plant flowering was not always achieved. Accessions were grouped according to flowering time. A stratified sample of 50 accessions was selected from these groups, including 10 non-flowering and 40 flowering accessions of diverse geographic origins and phenological variation. The flowering time observed in the sampled accessions when grown in the greenhouse were found to be significantly correlated to the flowering time observed in the field locations in Iowa (r = 0.79) and Kansas (r = 0.49). Thirty SSR markers, selected across 18 Brassica linkage groups from BrassicaDB, and 3 derived from Brassica expressed sequence tags (ESTs) were scored in the stratified sample. An average of three bands per SSR primer pair was observed. Associations of SSR marker fragments with the life forms were determined. Analysis of molecular variation by using cluster analysis and ordination resulted in recognizable, distinct groups of annual and biennial life-form types, which may have direct applications for planning and management of future seed regenerations. Mention of commercial brand names in this paper does not constitute an endorsement of any product by the U.S. Department of Agriculture or cooperating agencies.     

Geochemistry of the Hyperalkaline Gorka Pit Lake (pH?>?13) in the Chrzanow Region, Southern Poland

The Gorka pit lake was formed in an inactive Jurassic limestone quarry after cessation of open-pit dewatering. The main problem of the water quality in this area is linked to a large volume of extremely alkaline leachate disposed in the flooded quarry. The lake is meromictic due to a large density contrast between shallow and deep water layers. Water in the lake is of the Na?CCO₃?COH type, pH is in the range from 11.5 to 13.3, and there are high concentrations of sulfate and several toxic elements (Al, As, Cr, Mo, P, and V). The chemical composition of the extremely alkaline leachate was formed as a result of the groundwater interaction with the industrial red mud wastes containing 5?C10 wt.% of sodium carbonate. There is a trend of increasing concentrations and pH values with depth, mainly due to the in-gassing of atmospheric CO₂ into the surface layer and due to density stratification in the water column. Similar stratification is observed in groundwater wells around the lake. High dissolved concentrations of oxyanionic contaminants such as As, Cr, and V are caused by their high mobility and desorption under extremely alkaline conditions. In spite of reducing conditions at the bottom of the lake, caused by high concentrations of dumped organic matter, sulfate behaves conservatively because sulfate reducing bacteria do not survive in this pH range.     

Growth Performance of All-Female and Mixed-Sex Common Carp Cyprinus Carpio L. Populations in the Central Europe Climatic Conditions

The results of a 4-yr study focused on comparing growth performance in all-female and mixed-sex populations of common carp are presented. All-female and mixed-sex populations of purebred Northern mirror carp (M72) and scaly crossbreds of female Ropsha (ROP) and male/neomale M72 carp (ROP × M72) were used for this experiment. Average weight and survival after each growing season and slaughtering value after the third and fourth year of the study were measured. While after 8 wk of rearing no differences between all-female and mixed-sex populations were found, the 1-yr-old all-female mirror carp population (M72) gained 29.7% more weight ( P < 0.0001) than the mixed-sex (68.5:± 15.8 g against 52.8:± 13.9 g; meant S.D.) population. After the second, third and fourth year of rearing, live weight was 9.5% ( P = 0.0062) and 6.8% ( P = 0.0229) and insignificantly 5.1 % higher, respectively, in the all-female population. There was no significant difference, even after the fourth growing season, in live weight between all-females and bisexual scaly crossbreds (2,192 g± 478.3 and 2,206 g± 484.5, respectively). The percentage of the main edible parts (processed body, filleting yield) was significantly higher in both mirror and scaly, all-female populations at 3 yr of age but not significantly different in 4-yr-old fish. No distinct differences in survival and body shape of all-female and bisexual populations were found. The potential of all-female populations for commercial production is discussed.     

Morphological and genetic variation of Melolontha spp. from pine stands with different composition and proportion of admixed tree species

European Journal of Forest Research - Increasing areas of gradation, making it difficult or impossible to perform restorations and forestations, and as causing tree crown damage, result in the need...     

Synchronous fluorescence spectroscopy of edible vegetable oils. Quantification of tocopherols

The study demonstrates the application of front face and right angle synchronous fluorescence spectroscopy for the characterization of edible oils. The method enables monitoring of tocopherols, pheophytins, and other fluorescent components in edible oils. Principal component analysis of synchronous fluorescence spectra revealed sample clustering according to the type of oil. Partial least-squares regression was utilized to develop calibration models between fluorescence spectra and total tocopherol content determined by HPLC. The regression models showed a good ability to predict tocopherol content. The best fitting results were obtained for 1% v/v diluted oils and for bulk samples using the entire spectrum, yielding the regression coefficient, r, of 0.991, and root mean square error of cross-validation of approximately 8%. The results presented confirm the capabilities of the fluorescence techniques as a tool for the analysis of edible oils.     

Persisting bark beetle outbreak indicates the unsustainability of secondary Norway spruce forests: case study from Central Europe

? Context

Secondary Norway spruce forests in the Western Beskids are among the most damaged forests in Europe. Although spruce bark beetle (Ips typographus) has been recently causing large-scale damage to these forests, our understanding of I. typographus dynamics in this environment is inadequate for evaluating forest sustainability.

? Aim

This study aims to evaluate the patterns of damage caused by I. typographus to spruce forests with compromised ecological stability.

? Methods

Forest infestation by I. typographus was inferred from sanitary felling data collected from 1998 to 2004. Stand and site data were obtained from forest management plans. Spatial-dependence analysis, ordinary kriging and neural network-based regression modelling were used to investigate the patterns of infestation and the casual relationships in the studied ecosystem.

? Results

I. typographus long-distance dispersal substantially decreased with outbreak culmination. The spread of infestation was only weakly related to stand and site parameters. Infestations spread isotropically at the stand and patch level but directionally at the regional scale.

? Conclusions

The large-scale spread of infestation can be explained by the uniform age and species composition of the investigated forests and by the ability of populations to overwhelm suboptimal trees. The observations presented here suggest that secondary spruce forests in Europe may be unsustainable due to unprecedented bark beetle outbreaks, which can be further amplified by changing climate.     

An enzyme-linked immunosorbent assay for detection of avian influenza virus subtypes H5 and H7 antibodies

Background

Avian influenza virus (AIV) subtypes H5 and H7 attracts particular attention because of the risk of their potential pathogenicity in poultry. The haemagglutination inhibition (HI) test is widely used as subtype specific test for serological diagnostics despite the laborious nature of this method. However, enzyme-linked immunosorbent assays (ELISAs) are being explored as an alternative test method.H5 and H7 specific monoclonal antibodies were experimentally raised and used in the development of inhibition ELISAs for detection of serological response specifically directed against AIV subtypes H5 and H7. The ELISAs were evaluated with polyclonal chicken anti-AIV antibodies against AIV subtypes: H1N2, H5N2, H5N7, H7N1, H7N7, H9N9, H10N4 and H16N3.

Results

Both the H5 and H7 ELISA proved to have a high sensitivity and specificity and the ELISAs detected H5 and H7 antibodies earlier during experimental infection than the HI test did. The reproducibility of the ELISA’s performed at different times was high with Pearson correlation coefficients of 0.96-0.98.

Conclusions

The ELISAs are a potential alternative to the HI test for screening of large amounts of avian sera, although only experimental sera were tested in this study.     

Low molecular weight poly(lactic acid) microparticles for controlled release of the herbicide metazachlor: preparation, morphology, and release kinetics

The preemergence chloroacetamide herbicide metazachlor was encapsulated in biodegradable low molecular weight poly(lactic acid) micro- and submicroparticles, and its release to the water environment was investigated. Three series of particles, S, M, and L, varying in their size (from 0.6 to 8 μm) and with various initial amounts of the active agent (5%, 10%, 20%, 30% w/w) were prepared by the oil-in-water solvent evaporation technique with gelatin as biodegradable surfactant. The encapsulation efficiencies reached were about 60% and appeared to be lower for smaller particles. Generally, it was found that the rate of herbicide release decreased with increasing size of particles. After 30 days the portions of the herbicide released for its highest loading (30% w/w) were 92%, 56%, and 34% for about 0.6, 0.8, and 8 μm particles, respectively. The release rates were also lower for lower herbicide loadings. Metazachlor release from larger particles tended to be a diffusion-controlled process, while for smaller particles the kinetics was strongly influenced by an initial burst release.     

Water Lettuce Pistia stratiotes L. Response to Lead Toxicity

The effects of one of the most toxic heavy metals, lead (Pb), applied in two different concentrations and combined with chelate application were investigated on the water macrophyte (Pistia stratiotes L.) physiology. The influences were observed by the chlorophyll and free amino acid content determination. Also the lead accumulation in macrophyte biomass was investigated to assess the potential efficiency of this plant for rhizofiltration of highly Pb-polluted water. Na EDTA and Na citrate were used as chelates and Pb(NO₃)₂ as lead supplement. The application of organic chelates simulated conditions of an induced phytoextraction process. Statistical analyses were performed as a one-way ANOVA with a subsequent Tukey HSD test at a level of P < 0.05. Pb contents in both root and leaf tissues gradually increased with increasing Pb concentrations in the nutrient solution. More lead was accumulated in leaves than in roots within all treatments. The total chlorophyll content decreased with increased Pb concentration and with a higher content of chelates. The chelate addition increased the total amino acid content in leaves but decreased the total amino acid content in roots. The addition of lead with chelates decreased the dry biomass weight. However, water macrophyte showed extremely high lead accumulation in biomass in the short term (up to 8 days) and this accumulation potential could be used for relatively fast and effective decrease of high concentration of this risk element in contaminated water or sewage.